Maribacter sedimenticola strain DSM 19840

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Maribacter

Description

Maribacter sedimenticola strain DSM 19840 is a Gram-negative, rod-shaped bacterium that is non-spore-forming and exhibits an aerobic metabolism. This strain thrives optimally at a temperature of 25.0°C, indicating a preference for moderate environmental conditions typical of marine environments. The classification of M. sedimenticola within the genus Maribacter suggests that it may play a role in the microbial communities associated with sedimentary habitats, although specific ecological interactions remain to be elucidated. Its aerobic nature implies that it requires oxygen for growth, which aligns with its potential niche in oxygen-rich environments such as coastal sediments or water columns. Understanding the traits of M. sedimenticola can provide insights into the metabolic processes occurring in these ecosystems. For instance, the absence of sporulation may suggest a reliance on stable environmental conditions or nutrient availability for survival, rather than the ability to withstand extreme stressors through spore formation. This characteristic, combined with its optimal growth temperature, may indicate its ecological role in nutrient cycling and organic matter degradation within its habitat. Further research into its physiological and biochemical pathways could illuminate its contributions to sedimentary ecosystems and microbial diversity.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusMaribacter
SpeciesMaribacter sedimenticola
Strainstrain DSM 19840

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Maribacter sedimenticola strain DSM 19840


Gene Summary

Adenine Count

1334823 bp

Thymine Count

1330453 bp

Guanine Count

806262 bp

Cytosine Count

793401 bp

Genome Length

4269365 bp

Protein-coding Genes

3666 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
gliding motility-associated c-terminal domain-containing proteinSAMN04488009_0264Not Available+1 - 4884172907.0
5s ribosomal rna . bacterial tsuNot AvailableNot Available+159 - 27018.01
type ix secretion system membrane protein, porp/sprf familySAMN04488009_0265Not Available+4898 - 585436399.8
dihydroneopterin aldolaseSAMN04488009_0266Not Available+5899 - 625813251.2
Trna-cysNot AvailableNot Available+6362 - 6435Not Available
doxx proteinSAMN04488009_0268Not Available-6576 - 697114521.3
dna polymerase-3 subunit delta'SAMN04488009_0269Not Available-6978 - 813843813.9
phosphoglycerate kinaseSAMN04488009_0270Not Available+8264 - 945442486.1
membrane-bound lytic murein transglycosylase dSAMN04488009_0271Not Available+9574 - 1121762504.8
protein of unknown functionSAMN04488009_0272Not Available+11230 - 1223137847.5

Displaying genes 1 – 10 of 3705 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites