Maribacter sedimenticola strain DSM 19840

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Maribacter

Description

Maribacter sedimenticola strain DSM 19840 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain is non-motile and possesses flagella, yet does not form spores. It thrives optimally at a temperature of 25°C, categorizing it as mesophilic. Maribacter sedimenticola has a single replicon, which is indicative of its genomic structure. The accession number for this strain is FZNV00000000.1. The ecological significance of Maribacter sedimenticola may be tied to its aerobic lifestyle and the role it plays in sediment environments. As a member of the Maribacter genus, it may contribute to the degradation of organic matter and the cycling of nutrients in aquatic ecosystems. Its non-motile nature suggests that it relies on environmental currents for distribution rather than active movement, which is a common trait among bacteria inhabiting sediment. Understanding the characteristics and behavior of Maribacter sedimenticola can provide insights into microbial interactions within its ecological niche and the overall functioning of sedimentary microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusMaribacter
SpeciesMaribacter sedimenticola
Strainstrain DSM 19840

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Maribacter sedimenticola strain DSM 19840
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Maribacter sedimenticola strain DSM 19840 genome assembly, contig:

Gene Summary

Adenine Count

1334823 bp

Thymine Count

1330453 bp

Guanine Count

806262 bp

Cytosine Count

793401 bp

Genome Length

4269365 bp

Protein-coding Genes

3666 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polysaccharide pyruvyl transferase family protein wcakSAMN04488009_3081Not AvailableNegative3242372 - 324348442615.1
membrane protein involved in the export of o-antigen and teichoic acidSAMN04488009_3082Not AvailableNegative3243486 - 324501857988.0
o-antigen ligaseSAMN04488009_3083Not AvailableNegative3245130 - 324632645789.1
udp-n-acetylglucosamine 2-epimerase (non-hydrolysing)SAMN04488009_3084Not AvailableNegative3246420 - 324752040757.8
glycosyltransferase involved in cell wall bisynthesisSAMN04488009_3085Not AvailableNegative3247670 - 324886645623.6
hypothetical proteinSAMN04488009_3086Not AvailablePositive3249078 - 325072762654.8
hypothetical proteinSAMN04488009_3087Not AvailablePositive3250760 - 325239764681.3
dtdp-4-amino-4,6-dideoxygalactose transaminaseSAMN04488009_3089Not AvailablePositive3253079 - 325430545483.0
sugar transferase involved in lps biosynthesis (colanic, teichoic acid)SAMN04488009_3090Not AvailablePositive3254307 - 325489422553.4
por secretion system c-terminal sorting domain-containing proteinSAMN04488009_3091Not AvailablePositive3255141 - 3258995137042.0

Displaying genes 2801 – 2810 of 3705 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.