Maribacter sedimenticola strain DSM 19840

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Maribacter

Description

Maribacter sedimenticola strain DSM 19840 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain is non-motile and possesses flagella, yet does not form spores. It thrives optimally at a temperature of 25°C, categorizing it as mesophilic. Maribacter sedimenticola has a single replicon, which is indicative of its genomic structure. The accession number for this strain is FZNV00000000.1. The ecological significance of Maribacter sedimenticola may be tied to its aerobic lifestyle and the role it plays in sediment environments. As a member of the Maribacter genus, it may contribute to the degradation of organic matter and the cycling of nutrients in aquatic ecosystems. Its non-motile nature suggests that it relies on environmental currents for distribution rather than active movement, which is a common trait among bacteria inhabiting sediment. Understanding the characteristics and behavior of Maribacter sedimenticola can provide insights into microbial interactions within its ecological niche and the overall functioning of sedimentary microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusMaribacter
SpeciesMaribacter sedimenticola
Strainstrain DSM 19840

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Maribacter sedimenticola strain DSM 19840
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Maribacter sedimenticola strain DSM 19840 genome assembly, contig:

Gene Summary

Adenine Count

1334823 bp

Thymine Count

1330453 bp

Guanine Count

806262 bp

Cytosine Count

793401 bp

Genome Length

4269365 bp

Protein-coding Genes

3666 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
kelch motif-containing proteinSAMN04488009_3060Not AvailablePositive3218394 - 321918128545.5
por secretion system c-terminal sorting domain-containing proteinSAMN04488009_3062Not AvailablePositive3219182 - 322005431314.7
udp-n-acetylglucosamine 4-epimeraseSAMN04488009_3063Not AvailablePositive3220228 - 322122937268.4
udpglucose 6-dehydrogenaseSAMN04488009_3064Not AvailablePositive3221233 - 322256149637.8
udp-n-acetyl-d-galactosamine dehydrogenaseSAMN04488009_3065Not AvailablePositive3222582 - 322386547280.0
hypothetical proteinSAMN04488009_3066Not AvailablePositive3224120 - 322577862713.6
glycosyl transferase family 2SAMN04488009_3067Not AvailablePositive3225937 - 322674631337.2
udp-glucuronate 4-epimeraseSAMN04488009_3068Not AvailableNegative3226784 - 322779138529.8
o-antigen ligaseSAMN04488009_3069Not AvailablePositive3228166 - 322942849349.5
membrane protein involved in the export of o-antigen and teichoic acidSAMN04488009_3070Not AvailablePositive3229440 - 323089454985.4

Displaying genes 2781 – 2790 of 3705 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.