Maribacter sedimenticola strain DSM 19840

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Maribacter

Description

Maribacter sedimenticola strain DSM 19840 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain is non-motile and possesses flagella, yet does not form spores. It thrives optimally at a temperature of 25°C, categorizing it as mesophilic. Maribacter sedimenticola has a single replicon, which is indicative of its genomic structure. The accession number for this strain is FZNV00000000.1. The ecological significance of Maribacter sedimenticola may be tied to its aerobic lifestyle and the role it plays in sediment environments. As a member of the Maribacter genus, it may contribute to the degradation of organic matter and the cycling of nutrients in aquatic ecosystems. Its non-motile nature suggests that it relies on environmental currents for distribution rather than active movement, which is a common trait among bacteria inhabiting sediment. Understanding the characteristics and behavior of Maribacter sedimenticola can provide insights into microbial interactions within its ecological niche and the overall functioning of sedimentary microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusMaribacter
SpeciesMaribacter sedimenticola
Strainstrain DSM 19840

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Maribacter sedimenticola strain DSM 19840
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Maribacter sedimenticola strain DSM 19840 genome assembly, contig:

Gene Summary

Adenine Count

1334823 bp

Thymine Count

1330453 bp

Guanine Count

806262 bp

Cytosine Count

793401 bp

Genome Length

4269365 bp

Protein-coding Genes

3666 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN04488009_3050Not AvailablePositive3206210 - 320704030844.1
dna polymerase-3 subunit betaSAMN04488009_3051Not AvailablePositive3207311 - 320842941086.0
hypothetical proteinSAMN04488009_3052Not AvailableNegative3208501 - 320886613287.7
hypothetical proteinSAMN04488009_3053Not AvailableNegative3208937 - 320933815127.9
trna modification gtpase trmeSAMN04488009_3054Not AvailablePositive3209448 - 321084551265.6
tyrosine-protein phosphatase ywqeSAMN04488009_3055Not AvailablePositive3210861 - 321159828140.3
capsular exopolysaccharide familySAMN04488009_3056Not AvailableNegative3211606 - 321397588145.0
polysaccharide export outer membrane proteinSAMN04488009_3057Not AvailableNegative3214036 - 321475526393.7
ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epscSAMN04488009_3058Not AvailableNegative3214834 - 321676872715.8
dtdp-4-amino-4,6-dideoxygalactose transaminaseSAMN04488009_3059Not AvailableNegative3216765 - 321790442107.5

Displaying genes 2771 – 2780 of 3705 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.