Maribacter sedimenticola strain DSM 19840

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Maribacter

Description

Maribacter sedimenticola strain DSM 19840 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain is non-motile and possesses flagella, yet does not form spores. It thrives optimally at a temperature of 25°C, categorizing it as mesophilic. Maribacter sedimenticola has a single replicon, which is indicative of its genomic structure. The accession number for this strain is FZNV00000000.1. The ecological significance of Maribacter sedimenticola may be tied to its aerobic lifestyle and the role it plays in sediment environments. As a member of the Maribacter genus, it may contribute to the degradation of organic matter and the cycling of nutrients in aquatic ecosystems. Its non-motile nature suggests that it relies on environmental currents for distribution rather than active movement, which is a common trait among bacteria inhabiting sediment. Understanding the characteristics and behavior of Maribacter sedimenticola can provide insights into microbial interactions within its ecological niche and the overall functioning of sedimentary microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusMaribacter
SpeciesMaribacter sedimenticola
Strainstrain DSM 19840

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Maribacter sedimenticola strain DSM 19840
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Maribacter sedimenticola strain DSM 19840 genome assembly, contig:

Gene Summary

Adenine Count

1334823 bp

Thymine Count

1330453 bp

Guanine Count

806262 bp

Cytosine Count

793401 bp

Genome Length

4269365 bp

Protein-coding Genes

3666 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN04488009_2306Not AvailablePositive2299239 - 229974218796.5
camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinasesSAMN04488009_2307Not AvailablePositive2299839 - 230040522089.6
uncharacterized membrane proteinSAMN04488009_2308Not AvailablePositive2300456 - 230091117284.9
hypothetical proteinSAMN04488009_2309Not AvailablePositive2301074 - 230150215995.3
hypothetical proteinSAMN04488009_2310Not AvailablePositive2301857 - 230230317101.6
amidohydrolase family proteinSAMN04488009_2311Not AvailablePositive2302558 - 230405155286.4
murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domainSAMN04488009_2312Not AvailablePositive2304181 - 230515836843.2
rdd family proteinSAMN04488009_2313Not AvailablePositive2305352 - 230575915089.5
rna polymerase, sigma subunit, sigzSAMN04488009_2314Not AvailablePositive2305963 - 230650220901.2
phenazine biosynthesis protein phzf familySAMN04488009_2315Not AvailablePositive2306559 - 230744031930.7

Displaying genes 2031 – 2040 of 3705 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.