Maribacter sedimenticola strain DSM 19840

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Maribacter

Description

Maribacter sedimenticola strain DSM 19840 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain is non-motile and possesses flagella, yet does not form spores. It thrives optimally at a temperature of 25°C, categorizing it as mesophilic. Maribacter sedimenticola has a single replicon, which is indicative of its genomic structure. The accession number for this strain is FZNV00000000.1. The ecological significance of Maribacter sedimenticola may be tied to its aerobic lifestyle and the role it plays in sediment environments. As a member of the Maribacter genus, it may contribute to the degradation of organic matter and the cycling of nutrients in aquatic ecosystems. Its non-motile nature suggests that it relies on environmental currents for distribution rather than active movement, which is a common trait among bacteria inhabiting sediment. Understanding the characteristics and behavior of Maribacter sedimenticola can provide insights into microbial interactions within its ecological niche and the overall functioning of sedimentary microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusMaribacter
SpeciesMaribacter sedimenticola
Strainstrain DSM 19840

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Maribacter sedimenticola strain DSM 19840
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Maribacter sedimenticola strain DSM 19840 genome assembly, contig:

Gene Summary

Adenine Count

1334823 bp

Thymine Count

1330453 bp

Guanine Count

806262 bp

Cytosine Count

793401 bp

Genome Length

4269365 bp

Protein-coding Genes

3666 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna recombination protein rmucSAMN04488009_1661Not AvailableNegative1641954 - 164330351758.1
iron complex transport system atp-binding proteinSAMN04488009_1662Not AvailableNegative1643417 - 164419928910.4
iron complex transport system permease proteinSAMN04488009_1663Not AvailableNegative1644218 - 164524936645.5
iron complex transport system substrate-binding proteinSAMN04488009_1664Not AvailableNegative1645250 - 164639842370.4
vitamin b12 transporterSAMN04488009_1665Not AvailablePositive1646795 - 164866668912.9
c-terminal processing protease ctpa/prc, contains a pdz domainSAMN04488009_1666Not AvailableNegative1648724 - 165019055035.1
c-terminal processing protease ctpa/prc, contains a pdz domainSAMN04488009_1667Not AvailableNegative1650218 - 165174756514.7
rna polymerase sigma-70 factor, ecf subfamilySAMN04488009_1668Not AvailablePositive1651978 - 165248719800.0
hypothetical proteinSAMN04488009_1669Not AvailablePositive1652474 - 165290816783.1
protein of unknown functionSAMN04488009_1670Not AvailablePositive1652914 - 165347120661.2

Displaying genes 1391 – 1400 of 3705 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.