Maribacter sedimenticola strain DSM 19840

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Maribacter

Description

Maribacter sedimenticola strain DSM 19840 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain is non-motile and possesses flagella, yet does not form spores. It thrives optimally at a temperature of 25°C, categorizing it as mesophilic. Maribacter sedimenticola has a single replicon, which is indicative of its genomic structure. The accession number for this strain is FZNV00000000.1. The ecological significance of Maribacter sedimenticola may be tied to its aerobic lifestyle and the role it plays in sediment environments. As a member of the Maribacter genus, it may contribute to the degradation of organic matter and the cycling of nutrients in aquatic ecosystems. Its non-motile nature suggests that it relies on environmental currents for distribution rather than active movement, which is a common trait among bacteria inhabiting sediment. Understanding the characteristics and behavior of Maribacter sedimenticola can provide insights into microbial interactions within its ecological niche and the overall functioning of sedimentary microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusMaribacter
SpeciesMaribacter sedimenticola
Strainstrain DSM 19840

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Maribacter sedimenticola strain DSM 19840
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Maribacter sedimenticola strain DSM 19840 genome assembly, contig:

Gene Summary

Adenine Count

1334823 bp

Thymine Count

1330453 bp

Guanine Count

806262 bp

Cytosine Count

793401 bp

Genome Length

4269365 bp

Protein-coding Genes

3666 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gas vesicle proteinSAMN04488009_1371Not AvailableNegative1294874 - 129520312115.5
acetate kinaseSAMN04488009_1372Not AvailableNegative1295400 - 129658443124.0
phosphate acetyltransferaseSAMN04488009_1373Not AvailableNegative1296595 - 129868876306.6
hypothetical proteinSAMN04488009_1374Not AvailablePositive1299032 - 129978429207.6
l,d-transpeptidase catalytic domainSAMN04488009_1375Not AvailablePositive1299821 - 130075035996.4
hypothetical proteinSAMN04488009_1376Not AvailablePositive1300822 - 130122315476.1
cobalt-zinc-cadmium resistance protein czcaSAMN04488009_1377Not AvailablePositive1301302 - 1305636159822.0
membrane fusion protein, cobalt-zinc-cadmium efflux systemSAMN04488009_1378Not AvailablePositive1305647 - 130678942593.3
thioredoxin-likeSAMN04488009_1379Not AvailablePositive1306872 - 130730916671.1
thiamine biosynthesis lipoproteinSAMN04488009_1380Not AvailablePositive1307346 - 130829034158.2

Displaying genes 1101 – 1110 of 3705 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.