Fibrobacter sp. UWB13

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter sp. UWB13 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This organism has a single replicon, indicating a simplified genetic structure that is typical among certain bacterial species. The accession number for Fibrobacter sp. UWB13 is FXAX00000000.1, which serves as a unique identifier for genetic and genomic studies. The traits of Fibrobacter sp. UWB13 position it within the diverse ecosystem of microbial life, particularly in environments where cellulose degradation is crucial. Fibrobacter species are known for their role in breaking down plant materials, which significantly contributes to nutrient cycling in various habitats. The motility facilitated by flagella may enhance the bacterium's ability to colonize and thrive in fluctuating environments, potentially leading to increased efficiency in cellulose degradation. In summary, the combination of its Gram-negative status, rod shape, motility, and single replicon structure underscores the adaptive capabilities of Fibrobacter sp. UWB13. Such traits may play a vital role in its ecological niche, particularly in anaerobic environments where plant biomass decomposition occurs. Understanding these characteristics can provide insight into the ecological roles of similar microorganisms in nutrient cycling and their potential applications in biotechnological processes related to biomass conversion.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter sp. UWB13
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Fibrobacter sp. UWB13
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter sp. UWB13 genome assembly, contig: Ga0136277_110,

Gene Summary

Adenine Count

1023895 bp

Thymine Count

957354 bp

Guanine Count

871482 bp

Cytosine Count

951915 bp

Genome Length

3804669 bp

Protein-coding Genes

3084 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna (cytosine-5)-methyltransferase 1SAMN05720489_1690Not AvailablePositive2010973 - 201214244980.6
hypothetical proteinSAMN05720489_1691Not AvailablePositive2012136 - 201338648048.9
hypothetical proteinSAMN05720489_1692Not AvailablePositive2013391 - 201474351222.6
llaji restriction endonucleaseSAMN05720489_1693Not AvailablePositive2014727 - 201602550574.0
mrna-degrading endonuclease rele, toxin component of the relbe toxin-antitoxin systemSAMN05720489_1694Not AvailablePositive2016189 - 201654213904.9
helix-turn-helixSAMN05720489_1695Not AvailablePositive2016502 - 201691815751.4
atp-dependent dna helicase recgSAMN05720489_1696Not AvailablePositive2017054 - 201860758696.7
hypothetical proteinSAMN05720489_1697Not AvailablePositive2018732 - 201907613433.7
winged helix-turn-helix dna-bindingSAMN05720489_1698Not AvailablePositive2019094 - 201944713079.6
transporter, nhac familySAMN05720489_1699Not AvailablePositive2019467 - 202081047135.4

Displaying genes 1681 – 1690 of 2420 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.