Fibrobacter sp. UWB13

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter sp. UWB13 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This organism has a single replicon, indicating a simplified genetic structure that is typical among certain bacterial species. The accession number for Fibrobacter sp. UWB13 is FXAX00000000.1, which serves as a unique identifier for genetic and genomic studies. The traits of Fibrobacter sp. UWB13 position it within the diverse ecosystem of microbial life, particularly in environments where cellulose degradation is crucial. Fibrobacter species are known for their role in breaking down plant materials, which significantly contributes to nutrient cycling in various habitats. The motility facilitated by flagella may enhance the bacterium's ability to colonize and thrive in fluctuating environments, potentially leading to increased efficiency in cellulose degradation. In summary, the combination of its Gram-negative status, rod shape, motility, and single replicon structure underscores the adaptive capabilities of Fibrobacter sp. UWB13. Such traits may play a vital role in its ecological niche, particularly in anaerobic environments where plant biomass decomposition occurs. Understanding these characteristics can provide insight into the ecological roles of similar microorganisms in nutrient cycling and their potential applications in biotechnological processes related to biomass conversion.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter sp. UWB13
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Fibrobacter sp. UWB13
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter sp. UWB13 genome assembly, contig: Ga0136277_110,

Gene Summary

Adenine Count

1023895 bp

Thymine Count

957354 bp

Guanine Count

871482 bp

Cytosine Count

951915 bp

Genome Length

3804669 bp

Protein-coding Genes

3084 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
caspase domain-containing proteinSAMN05720489_1670Not AvailableNegative1990080 - 199239283291.9
hypothetical proteinSAMN05720489_1671Not AvailableNegative1992392 - 199318629108.0
rna polymerase sigma-70 factor, ecf subfamilySAMN05720489_1672Not AvailableNegative1993186 - 199368919066.0
putative tm nitroreductaseSAMN05720489_1673Not AvailableNegative1993820 - 199453026406.8
t/g mismatch-specific endonucleaseSAMN05720489_1674Not AvailableNegative1994582 - 199508819386.5
tripeptide aminopeptidaseSAMN05720489_1675Not AvailablePositive1995177 - 199642445741.7
di-and tricarboxylate transporterSAMN05720489_1676Not AvailablePositive1996510 - 199806354861.8
major paralogous domain-containing proteinSAMN05720489_1677Not AvailablePositive1998128 - 199888328822.9
predicted dehydrogenaseSAMN05720489_1678Not AvailableNegative1998975 - 200094273279.4
2-dehydropantoate 2-reductaseSAMN05720489_1679Not AvailablePositive2001129 - 200204933747.9

Displaying genes 1661 – 1670 of 2420 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.