Fibrobacter sp. UWB13

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter sp. UWB13 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This organism has a single replicon, indicating a simplified genetic structure that is typical among certain bacterial species. The accession number for Fibrobacter sp. UWB13 is FXAX00000000.1, which serves as a unique identifier for genetic and genomic studies. The traits of Fibrobacter sp. UWB13 position it within the diverse ecosystem of microbial life, particularly in environments where cellulose degradation is crucial. Fibrobacter species are known for their role in breaking down plant materials, which significantly contributes to nutrient cycling in various habitats. The motility facilitated by flagella may enhance the bacterium's ability to colonize and thrive in fluctuating environments, potentially leading to increased efficiency in cellulose degradation. In summary, the combination of its Gram-negative status, rod shape, motility, and single replicon structure underscores the adaptive capabilities of Fibrobacter sp. UWB13. Such traits may play a vital role in its ecological niche, particularly in anaerobic environments where plant biomass decomposition occurs. Understanding these characteristics can provide insight into the ecological roles of similar microorganisms in nutrient cycling and their potential applications in biotechnological processes related to biomass conversion.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter sp. UWB13
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Fibrobacter sp. UWB13
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter sp. UWB13


Gene Summary

Adenine Count

1023895 bp

Thymine Count

957354 bp

Guanine Count

871482 bp

Cytosine Count

951915 bp

Genome Length

3804669 bp

Protein-coding Genes

3084 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
superfamily ii dna or rna helicase, snf2 familySAMN05720489_1217Not AvailablePositive1438863 - 1442771146374.0
hypothetical proteinSAMN05720489_1218Not AvailablePositive1442830 - 144337820304.2
major paralogous domain-containing proteinSAMN05720489_1219Not AvailableNegative1443402 - 144411826065.2
fmn adenylyltransferase /riboflavin kinaseSAMN05720489_1220Not AvailableNegative1444284 - 144517733054.7
trna pseudouridine55 synthaseSAMN05720489_1221Not AvailableNegative1445193 - 144614934817.8
ribosome-binding factor aSAMN05720489_1222Not AvailableNegative1446150 - 144650313181.1
bacterial translation initiation factor 2 (bif-2)SAMN05720489_1223Not AvailableNegative1446503 - 1449610110803.0
nusa antitermination factorSAMN05720489_1224Not AvailableNegative1449674 - 145089745880.7
ribosome maturation factor rimpSAMN05720489_1225Not AvailableNegative1450911 - 145136316367.7
fibro-slime domain-containing proteinSAMN05720489_1226Not AvailableNegative1451505 - 145311258712.2

Displaying genes 1211 – 1220 of 2420 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.