Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN04488524_0989 | Not Available | Negative | 1182972 - 1184156 | 42227.5 |
| hypothetical protein | SAMN04488524_0990 | Not Available | Negative | 1184327 - 1184965 | 23622.4 |
| polyisoprenoid-binding protein ycei | SAMN04488524_0991 | Not Available | Positive | 1185103 - 1185684 | 20828.7 |
| mfs transporter, dha1 family, tetracycline resistance protein | SAMN04488524_0992 | Not Available | Positive | 1185805 - 1187049 | 44835.6 |
| bacteriocin-protection, ydei or ompd-associated | SAMN04488524_0993 | Not Available | Negative | 1187057 - 1187530 | 17805.5 |
| heat repeats | SAMN04488524_0994 | Not Available | Negative | 1187571 - 1188329 | 29316.2 |
| leucine carboxyl methyltransferase | SAMN04488524_0995 | Not Available | Positive | 1188416 - 1189291 | 33371.0 |
| acetyltransferase (gnat) family protein | SAMN04488524_0996 | Not Available | Positive | 1189318 - 1190118 | 30039.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_0997 | Not Available | Positive | 1190183 - 1190773 | 23280.8 |
| fecr family protein | SAMN04488524_0998 | Not Available | Positive | 1190822 - 1191979 | 43005.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

