Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mn2+ and fe2+ transporters of the nramp family | SAMN04488524_0979 | Not Available | Negative | 1166123 - 1167313 | 41250.2 |
| upf0271 protein | SAMN04488524_0980 | Not Available | Negative | 1167310 - 1168068 | 27115.4 |
| antagonist of kipi | SAMN04488524_0981 | Not Available | Negative | 1168061 - 1169017 | 34614.0 |
| inhibitor of kina | SAMN04488524_0982 | Not Available | Negative | 1169007 - 1169720 | 26427.7 |
| alpha-1,2-mannosidase, putative | SAMN04488524_0983 | Not Available | Negative | 1169769 - 1172006 | 83474.3 |
| beta-galactosidase/beta-glucuronidase | SAMN04488524_0984 | Not Available | Negative | 1172010 - 1174622 | 98642.8 |
| alpha-l-fucosidase | SAMN04488524_0985 | Not Available | Negative | 1174625 - 1176328 | 64367.2 |
| alpha-l-fucosidase | SAMN04488524_0986 | Not Available | Negative | 1176348 - 1177793 | 54935.5 |
| susd and ragb outer membrane lipoprotein | SAMN04488524_0987 | Not Available | Negative | 1177855 - 1179765 | 70681.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0988 | Not Available | Negative | 1179810 - 1182929 | 113460.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

