Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cellulase (glycosyl hydrolase family 5) | SAMN04488524_0969 | Not Available | Negative | 1149567 - 1150670 | 42029.4 |
| beta-xylosidase | SAMN04488524_0970 | Not Available | Negative | 1150672 - 1152288 | 60038.5 |
| fad dependent oxidoreductase | SAMN04488524_0971 | Not Available | Negative | 1152278 - 1153930 | 61642.2 |
| putative membrane protein | SAMN04488524_0972 | Not Available | Positive | 1154098 - 1154460 | 13052.5 |
| peroxiredoxin | SAMN04488524_0973 | Not Available | Negative | 1154453 - 1155604 | 42482.0 |
| susd family protein | SAMN04488524_0974 | Not Available | Negative | 1155616 - 1157049 | 53106.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0975 | Not Available | Negative | 1157072 - 1160611 | 128838.0 |
| fecr family protein | SAMN04488524_0976 | Not Available | Negative | 1160756 - 1161838 | 39794.7 |
| sigma-70 region 2 | SAMN04488524_0977 | Not Available | Negative | 1161915 - 1162484 | 22132.6 |
| beta-galactosidase | SAMN04488524_0978 | Not Available | Positive | 1162965 - 1166147 | 121466.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

