Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488524_0959 | Not Available | Negative | 1130976 - 1133435 | 90878.1 |
| protein of unknown function | SAMN04488524_0960 | Not Available | Negative | 1133471 - 1134472 | 39095.3 |
| starch-binding associating with outer membrane | SAMN04488524_0961 | Not Available | Negative | 1134488 - 1136566 | 78831.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0962 | Not Available | Negative | 1136577 - 1139639 | 114418.0 |
| ipt/tig domain-containing protein | SAMN04488524_0963 | Not Available | Negative | 1139660 - 1141039 | 52040.4 |
| aldose 1-epimerase | SAMN04488524_0964 | Not Available | Negative | 1141385 - 1142542 | 41927.7 |
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN04488524_0965 | Not Available | Negative | 1142564 - 1143697 | 42612.7 |
| beta-xylosidase, gh43 family | SAMN04488524_0966 | Not Available | Negative | 1143701 - 1145263 | 57098.0 |
| two component regulator propeller | SAMN04488524_0967 | Not Available | Positive | 1145551 - 1148739 | 120882.0 |
| helix-turn-helix domain-containing protein | SAMN04488524_0968 | Not Available | Positive | 1148736 - 1149515 | 29568.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

