Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteriocin-processing peptidase. cysteine peptidase. merops family c39 | SAMN04488524_0949 | Not Available | Positive | 1121501 - 1123666 | 80426.7 |
| hypothetical protein | SAMN04488524_0950 | Not Available | Positive | 1123864 - 1124502 | 23723.6 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488524_0951 | Not Available | Positive | 1124589 - 1125014 | 16230.2 |
| gtp-binding protein | SAMN04488524_0952 | Not Available | Negative | 1125020 - 1126024 | 36129.5 |
| adenylate kinase | SAMN04488524_0953 | Not Available | Negative | 1126033 - 1126638 | 22350.0 |
| ca2+:h+ antiporter | SAMN04488524_0954 | Not Available | Negative | 1126814 - 1127896 | 37839.1 |
| hypothetical protein | SAMN04488524_0955 | Not Available | Positive | 1128016 - 1128441 | 15368.7 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN04488524_0956 | Not Available | Negative | 1128446 - 1129045 | 22353.8 |
| dna-binding transcriptional regulator, lrp family | SAMN04488524_0957 | Not Available | Negative | 1129087 - 1129551 | 17557.2 |
| cysteine desulfurase | SAMN04488524_0958 | Not Available | Negative | 1129632 - 1130786 | 41278.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

