Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyceraldehyde 3-phosphate dehydrogenase | SAMN04488524_0939 | Not Available | Negative | 1110534 - 1111538 | 35773.8 |
| peptidase family m1 | SAMN04488524_0940 | Not Available | Negative | 1111653 - 1113233 | 59651.4 |
| hypothetical protein | SAMN04488524_0941 | Not Available | Positive | 1113327 - 1113452 | 4457.36 |
| hypothetical protein | SAMN04488524_0942 | Not Available | Positive | 1113460 - 1113672 | 8062.87 |
| dna helicase, putative | SAMN04488524_0943 | Not Available | Negative | 1113669 - 1115579 | 70578.8 |
| d-lactate dehydrogenase | SAMN04488524_0944 | Not Available | Negative | 1115579 - 1118401 | 103044.0 |
| transcriptional regulator, arac family with amidase-like domain | SAMN04488524_0945 | Not Available | Negative | 1118428 - 1119411 | 36499.4 |
| hypothetical protein | SAMN04488524_0946 | Not Available | Negative | 1119471 - 1119767 | 11095.9 |
| hypothetical protein | SAMN04488524_0947 | Not Available | Positive | 1120005 - 1120259 | 8598.5 |
| hlyd family secretion protein | SAMN04488524_0948 | Not Available | Positive | 1120303 - 1121493 | 45146.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

