Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsw | SAMN04488524_0929 | Not Available | Negative | 1099578 - 1100744 | 42275.4 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN04488524_0930 | Not Available | Negative | 1100747 - 1102090 | 49668.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SAMN04488524_0931 | Not Available | Negative | 1102090 - 1103337 | 46473.0 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN04488524_0932 | Not Available | Negative | 1103337 - 1104794 | 52715.3 |
| cell division protein ftsi (penicillin-binding protein 3) | SAMN04488524_0933 | Not Available | Negative | 1104796 - 1106898 | 77576.4 |
| hypothetical protein | SAMN04488524_0934 | Not Available | Negative | 1106888 - 1107307 | 16270.7 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN04488524_0935 | Not Available | Negative | 1107304 - 1108209 | 33690.4 |
| mraz protein | SAMN04488524_0936 | Not Available | Negative | 1108199 - 1108672 | 17918.6 |
| phosphoglycerate kinase | SAMN04488524_0937 | Not Available | Negative | 1108874 - 1110067 | 43002.8 |
| predicted n-acyltransferase, gnat family | SAMN04488524_0938 | Not Available | Negative | 1110110 - 1110541 | 15747.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

