Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function, duf479 | SAMN04488524_0919 | Not Available | Positive | 1087545 - 1088171 | 24433.2 |
| dna ligase (nad+) | SAMN04488524_0920 | Not Available | Positive | 1088189 - 1090201 | 75877.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488524_0921 | Not Available | Positive | 1090212 - 1091093 | 31387.7 |
| hypothetical protein | SAMN04488524_0922 | Not Available | Negative | 1091146 - 1091322 | 6497.81 |
| glycine c-acetyltransferase | SAMN04488524_0923 | Not Available | Negative | 1091581 - 1092822 | 46241.0 |
| cell division protein ftsz | SAMN04488524_0924 | Not Available | Negative | 1092988 - 1094646 | 60260.3 |
| cell division protein ftsa | SAMN04488524_0925 | Not Available | Negative | 1094776 - 1096137 | 49560.1 |
| cell division protein ftsq | SAMN04488524_0926 | Not Available | Negative | 1096162 - 1097076 | 34676.4 |
| udp-n-acetylmuramate--l-alanine ligase | SAMN04488524_0927 | Not Available | Negative | 1097069 - 1098424 | 49651.1 |
| udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferase | SAMN04488524_0928 | Not Available | Negative | 1098424 - 1099539 | 40222.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

