Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_0909 | Not Available | Positive | 1068750 - 1069739 | 34936.3 |
| hypothetical protein | SAMN04488524_0910 | Not Available | Positive | 1069866 - 1071950 | 77485.2 |
| chat domain-containing protein | SAMN04488524_0911 | Not Available | Positive | 1071938 - 1074658 | 103237.0 |
| 1,4-alpha-glucan branching enzyme | SAMN04488524_0912 | Not Available | Negative | 1074636 - 1076546 | 73890.7 |
| alpha-glucosidase | SAMN04488524_0913 | Not Available | Negative | 1076546 - 1079008 | 95745.6 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488524_0914 | Not Available | Negative | 1079174 - 1082089 | 105758.0 |
| penicillin amidase | SAMN04488524_0915 | Not Available | Positive | 1082287 - 1084722 | 91567.5 |
| hypothetical protein | SAMN04488524_0916 | Not Available | Positive | 1084727 - 1085077 | 12826.5 |
| acyl-protein synthetase, luxe | SAMN04488524_0917 | Not Available | Positive | 1085106 - 1086089 | 36594.9 |
| tyrosyl-trna synthetase | SAMN04488524_0918 | Not Available | Negative | 1086104 - 1087390 | 47945.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

