Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN04488524_0889 | Not Available | Positive | 1048772 - 1050538 | 66936.5 |
| hypothetical protein | SAMN04488524_0890 | Not Available | Negative | 1050569 - 1050868 | 11228.3 |
| tetratricopeptide repeat-containing protein | SAMN04488524_0891 | Not Available | Positive | 1051051 - 1052196 | 43466.2 |
| riboflavin synthase alpha chain | SAMN04488524_0892 | Not Available | Negative | 1052193 - 1052777 | 21419.5 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN04488524_0893 | Not Available | Negative | 1052788 - 1054278 | 54965.3 |
| l-threonine aldolase | SAMN04488524_0894 | Not Available | Negative | 1054290 - 1055324 | 37213.0 |
| hypothetical protein | SAMN04488524_0895 | Not Available | Positive | 1055645 - 1056502 | 32092.0 |
| 8-oxo-dgtp diphosphatase | SAMN04488524_0896 | Not Available | Negative | 1056587 - 1057276 | 27018.8 |
| 6-phosphofructokinase | SAMN04488524_0897 | Not Available | Positive | 1057394 - 1058380 | 35282.4 |
| hypothetical protein | SAMN04488524_0898 | Not Available | Positive | 1058377 - 1059219 | 31836.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

