Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase / fumarate reductase iron-sulfur subunit | SAMN04488524_0869 | Not Available | Negative | 1026108 - 1026854 | 27210.8 |
| succinate dehydrogenase subunit a | SAMN04488524_0870 | Not Available | Negative | 1026865 - 1028781 | 70708.0 |
| succinate dehydrogenase / fumarate reductase cytochrome b subunit | SAMN04488524_0871 | Not Available | Negative | 1028772 - 1029455 | 26357.7 |
| divalent anion:na+ symporter, dass family | SAMN04488524_0872 | Not Available | Negative | 1029467 - 1030897 | 52096.4 |
| phosphate-selective porin o and p | SAMN04488524_0873 | Not Available | Negative | 1030927 - 1032051 | 42719.4 |
| hypothetical protein | SAMN04488524_0874 | Not Available | Positive | 1032403 - 1033080 | 25767.0 |
| glutamate synthase domain-containing protein 2 | SAMN04488524_0875 | Not Available | Positive | 1033259 - 1034794 | 55952.0 |
| phosphoglycerol transferase mdob | SAMN04488524_0876 | Not Available | Positive | 1034852 - 1036780 | 73882.5 |
| gtra-like protein | SAMN04488524_0877 | Not Available | Positive | 1036784 - 1037269 | 18479.1 |
| phenylalanine-4-hydroxylase | SAMN04488524_0878 | Not Available | Positive | 1037333 - 1039123 | 67661.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

