Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-associated protein | SAMN04488524_0859 | Not Available | Negative | 1016546 - 1017238 | 25735.1 |
| protein of unknown function | SAMN04488524_0860 | Not Available | Negative | 1017334 - 1018026 | 23961.5 |
| dna polymerase iii, beta subunit | SAMN04488524_0861 | Not Available | Negative | 1018107 - 1019231 | 41285.3 |
| gliding-associated putative abc transporter substrate-binding component gldg | SAMN04488524_0862 | Not Available | Negative | 1019267 - 1020946 | 62736.0 |
| protein involved in gliding motility gldf | SAMN04488524_0863 | Not Available | Negative | 1020940 - 1021668 | 26927.5 |
| hypothetical protein | SAMN04488524_0864 | Not Available | Negative | 1021676 - 1022197 | 18502.2 |
| glycyl-trna synthetase | SAMN04488524_0865 | Not Available | Negative | 1022206 - 1023696 | 57887.9 |
| abc-2 type transport system atp-binding protein | SAMN04488524_0866 | Not Available | Positive | 1023802 - 1024512 | 26023.8 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488524_0867 | Not Available | Positive | 1024645 - 1025178 | 18556.3 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488524_0868 | Not Available | Positive | 1025486 - 1026103 | 22940.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

