Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna-[protein]-cysteine s-methyltransferase | SAMN04488524_0849 | Not Available | Positive | 1007905 - 1008402 | 18367.9 |
| protein of unknown function | SAMN04488524_0850 | Not Available | Positive | 1008406 - 1008921 | 19113.6 |
| hypothetical protein | SAMN04488524_0851 | Not Available | Negative | 1008925 - 1009338 | 14975.0 |
| gliding motility-associated protein gldc | SAMN04488524_0852 | Not Available | Negative | 1009342 - 1009677 | 12904.4 |
| hypothetical protein | SAMN04488524_0853 | Not Available | Negative | 1009677 - 1009955 | 10290.3 |
| atp-dependent rna helicase rhle | SAMN04488524_0854 | Not Available | Negative | 1009971 - 1011302 | 49524.0 |
| dihydroorotase | SAMN04488524_0855 | Not Available | Positive | 1011376 - 1012710 | 49313.9 |
| protein of unknown function | SAMN04488524_0856 | Not Available | Positive | 1012710 - 1013777 | 41492.5 |
| molecular chaperone hsca | SAMN04488524_0857 | Not Available | Positive | 1013790 - 1015640 | 67689.2 |
| s1/p1 nuclease | SAMN04488524_0858 | Not Available | Positive | 1015698 - 1016549 | 32479.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

