Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fes assembly protein iscx | SAMN04488524_0839 | Not Available | Negative | 998622 - 998864 | 9841.35 |
| ferredoxin, 2fe-2s | SAMN04488524_0840 | Not Available | Negative | 998889 - 999245 | 13030.6 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN04488524_0841 | Not Available | Negative | 999263 - 1000021 | 28019.1 |
| cytochrome c-type biogenesis protein ccmf | SAMN04488524_0842 | Not Available | Negative | 1000060 - 1002525 | 92867.6 |
| cytochrome c-type biogenesis protein ccme | SAMN04488524_0843 | Not Available | Negative | 1002531 - 1002941 | 15591.9 |
| glutamate dehydrogenase (nad(p)+) | SAMN04488524_0844 | Not Available | Negative | 1003206 - 1004627 | 51636.0 |
| hypothetical protein | SAMN04488524_0845 | Not Available | Negative | 1004777 - 1004995 | 8155.31 |
| heme exporter protein c | SAMN04488524_0846 | Not Available | Negative | 1004998 - 1005657 | 25079.8 |
| heme exporter protein b | SAMN04488524_0847 | Not Available | Negative | 1005726 - 1006388 | 24473.1 |
| chondroitinase b | SAMN04488524_0848 | Not Available | Negative | 1006417 - 1007802 | 49759.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

