Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | SAMN04488524_0829 | Not Available | Negative | 991644 - 991994 | 12700.6 |
| acyl-coa reductase (luxc) | SAMN04488524_0830 | Not Available | Positive | 992072 - 993091 | 38119.8 |
| hypothetical protein | SAMN04488524_0831 | Not Available | Positive | 993133 - 993336 | 7764.61 |
| cell division transport system atp-binding protein | SAMN04488524_0832 | Not Available | Positive | 993339 - 994022 | 25315.8 |
| molecular chaperone grpe | SAMN04488524_0833 | Not Available | Positive | 994151 - 994747 | 22291.2 |
| molecular chaperone dnaj | SAMN04488524_0834 | Not Available | Positive | 994755 - 995912 | 41489.2 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN04488524_0835 | Not Available | Positive | 995927 - 996925 | 36297.8 |
| septum formation protein | SAMN04488524_0836 | Not Available | Negative | 996911 - 997480 | 21117.3 |
| hypothetical protein | SAMN04488524_0837 | Not Available | Negative | 997559 - 998050 | 18267.3 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | SAMN04488524_0838 | Not Available | Negative | 998088 - 998615 | 19287.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

