Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase | SAMN04488524_0048 | Not Available | Negative | 55742 - 57601 | 68396.5 |
| starch-binding associating with outer membrane | SAMN04488524_0049 | Not Available | Negative | 57678 - 59207 | 57327.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0050 | Not Available | Negative | 59219 - 62581 | 122161.0 |
| fecr family protein | SAMN04488524_0051 | Not Available | Negative | 62717 - 63679 | 35387.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_0052 | Not Available | Negative | 63739 - 64329 | 22694.0 |
| hypothetical protein | SAMN04488524_0053 | Not Available | Positive | 64448 - 64777 | 12062.3 |
| cobalt-zinc-cadmium resistance protein czca | SAMN04488524_0054 | Not Available | Positive | 64875 - 69239 | 159481.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN04488524_0055 | Not Available | Positive | 69244 - 70551 | 46915.7 |
| cd2+/zn2+-exporting atpase | SAMN04488524_0056 | Not Available | Positive | 70592 - 72601 | 71973.6 |
| hypothetical protein | SAMN04488524_0057 | Not Available | Positive | 72709 - 74223 | 55243.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

