Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_0768 | Not Available | Positive | 914059 - 914658 | 23127.2 |
| fecr family protein | SAMN04488524_0769 | Not Available | Positive | 914750 - 915952 | 44511.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0770 | Not Available | Positive | 916068 - 919427 | 124056.0 |
| susd family protein | SAMN04488524_0771 | Not Available | Positive | 919439 - 921163 | 64195.9 |
| integral membrane protein | SAMN04488524_0772 | Not Available | Positive | 921287 - 921586 | 11436.3 |
| Trna-leu | Not Available | Not Available | Positive | 921631 - 921713 | Not Available |
| arylsulfatase a | SAMN04488524_0774 | Not Available | Positive | 921962 - 923389 | 52515.6 |
| signal transduction histidine kinase | SAMN04488524_0775 | Not Available | Positive | 923483 - 924808 | 49641.6 |
| hypothetical protein | SAMN04488524_0776 | Not Available | Negative | 924795 - 924992 | 7540.96 |
| hypothetical protein | SAMN04488524_0777 | Not Available | Negative | 925010 - 925171 | 6420.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

