Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04488524_0758 | Not Available | Positive | 907005 - 907493 | 18728.0 |
| cysteine desulfurase | SAMN04488524_0759 | Not Available | Negative | 907469 - 908626 | 41794.3 |
| hypothetical protein | SAMN04488524_0760 | Not Available | Positive | 908644 - 908841 | 7552.08 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04488524_0761 | Not Available | Positive | 908999 - 910234 | 48798.4 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN04488524_0762 | Not Available | Positive | 910278 - 910937 | 24589.3 |
| hypothetical protein | SAMN04488524_0763 | Not Available | Positive | 910941 - 911207 | 10213.1 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488524_0764 | Not Available | Negative | 911215 - 911694 | 17774.1 |
| transcriptional regulator, arsr family | SAMN04488524_0765 | Not Available | Negative | 911681 - 912022 | 13156.9 |
| hypothetical protein | SAMN04488524_0766 | Not Available | Positive | 912160 - 913032 | 31098.0 |
| hypothetical protein | SAMN04488524_0767 | Not Available | Negative | 913041 - 913979 | 35215.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

