Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii c-methyltransferase | SAMN04488524_0728 | Not Available | Negative | 869330 - 870121 | 28460.5 |
| sulfite reductase (ferredoxin) | SAMN04488524_0729 | Not Available | Negative | 870118 - 872208 | 78286.1 |
| hypothetical protein | SAMN04488524_0730 | Not Available | Positive | 872645 - 873835 | 45187.1 |
| hypothetical protein | SAMN04488524_0731 | Not Available | Positive | 873936 - 874664 | 27410.9 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN04488524_0732 | Not Available | Positive | 874664 - 875098 | 16226.9 |
| outer membrane transport energization protein exbd | SAMN04488524_0733 | Not Available | Negative | 875095 - 875604 | 18859.9 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488524_0734 | Not Available | Positive | 875740 - 876354 | 23709.0 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488524_0735 | Not Available | Positive | 876599 - 877534 | 35084.4 |
| hypothetical protein | SAMN04488524_0736 | Not Available | Negative | 877547 - 879433 | 70979.2 |
| hypothetical protein | SAMN04488524_0737 | Not Available | Negative | 879447 - 882206 | 102726.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

