Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 860435 - 860519 | Not Available |
| hypothetical protein | SAMN04488524_0719 | Not Available | Positive | 860857 - 861132 | 10476.5 |
| methionine aminopeptidase, type i | SAMN04488524_0720 | Not Available | Positive | 861199 - 861963 | 27763.2 |
| abc-type fe3+-hydroxamate transport system, substrate-binding protein | SAMN04488524_0721 | Not Available | Negative | 861960 - 862757 | 30482.2 |
| glucose-1-phosphate adenylyltransferase | SAMN04488524_0722 | Not Available | Negative | 862807 - 864075 | 46739.2 |
| starch synthase | SAMN04488524_0723 | Not Available | Negative | 864087 - 865493 | 53322.9 |
| sulfate adenylyltransferase subunit 1 | SAMN04488524_0724 | Not Available | Negative | 865863 - 867110 | 46383.4 |
| sulfate adenylyltransferase subunit 2 | SAMN04488524_0725 | Not Available | Negative | 867110 - 868015 | 34365.7 |
| phosphoadenosine phosphosulfate reductase | SAMN04488524_0726 | Not Available | Negative | 868028 - 868732 | 26965.2 |
| precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase | SAMN04488524_0727 | Not Available | Negative | 868729 - 869325 | 21725.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

