Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | SAMN04488524_0698 | Not Available | Negative | 839817 - 840581 | 28688.6 |
| chaperone lola | SAMN04488524_0699 | Not Available | Negative | 840621 - 841271 | 24353.1 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN04488524_0700 | Not Available | Negative | 841290 - 843836 | 95418.2 |
| ankyrin repeat | SAMN04488524_0701 | Not Available | Positive | 843950 - 844594 | 22736.3 |
| phage shock protein c (pspc) family protein | SAMN04488524_0702 | Not Available | Negative | 844595 - 844816 | 8708.94 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04488524_0703 | Not Available | Negative | 844882 - 845781 | 33389.0 |
| orotidine-5'-phosphate decarboxylase | SAMN04488524_0704 | Not Available | Negative | 845778 - 846653 | 32285.8 |
| transcription termination factor rho | SAMN04488524_0705 | Not Available | Positive | 846870 - 848684 | 66893.0 |
| cdp-diacylglycerol---serine o-phosphatidyltransferase | SAMN04488524_0706 | Not Available | Positive | 848709 - 849392 | 25380.8 |
| hpt (histidine-containing phosphotransfer) domain-containing protein | SAMN04488524_0707 | Not Available | Negative | 849401 - 849781 | 14491.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

