Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0038 | Not Available | Negative | 40584 - 43901 | 124149.0 |
| fecr family protein | SAMN04488524_0039 | Not Available | Negative | 43901 - 45103 | 44024.7 |
| type ii secretion system (t2ss), protein k | SAMN04488524_0040 | Not Available | Negative | 45853 - 47877 | 75839.7 |
| hypothetical protein | SAMN04488524_0041 | Not Available | Negative | 47894 - 48418 | 20864.2 |
| hypothetical protein | SAMN04488524_0042 | Not Available | Negative | 48406 - 48582 | 6803.92 |
| transcriptional regulator, asnc family | SAMN04488524_0043 | Not Available | Negative | 48714 - 49223 | 19833.0 |
| signal transduction histidine kinase | SAMN04488524_0044 | Not Available | Positive | 49459 - 51603 | 82307.6 |
| hypothetical protein | SAMN04488524_0045 | Not Available | Positive | 51649 - 52290 | 23655.3 |
| hypothetical protein | SAMN04488524_0046 | Not Available | Positive | 52390 - 53865 | 53619.4 |
| cytochrome c peroxidase | SAMN04488524_0047 | Not Available | Positive | 53932 - 55716 | 65900.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

