Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04488524_0677 | Not Available | Negative | 814341 - 815750 | 52163.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0678 | Not Available | Negative | 815762 - 819346 | 133661.0 |
| fecr family protein | SAMN04488524_0679 | Not Available | Negative | 819475 - 820680 | 44279.1 |
| sigma-70 region 2 | SAMN04488524_0680 | Not Available | Negative | 820729 - 821298 | 22140.8 |
| sialate o-acetylesterase | SAMN04488524_0681 | Not Available | Negative | 821402 - 822832 | 53265.4 |
| glycosyl hydrolase-like 10 | SAMN04488524_0682 | Not Available | Negative | 822846 - 824240 | 51845.3 |
| protein of unknown function | SAMN04488524_0683 | Not Available | Negative | 824263 - 825939 | 59537.3 |
| starch-binding associating with outer membrane | SAMN04488524_0684 | Not Available | Negative | 825963 - 827594 | 61195.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0685 | Not Available | Negative | 827613 - 831110 | 128276.0 |
| fecr family protein | SAMN04488524_0686 | Not Available | Negative | 831267 - 832433 | 42669.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

