Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_0665 | Not Available | Negative | 801761 - 802060 | 11360.5 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_0666 | Not Available | Positive | 802432 - 803715 | 49286.6 |
| tonb family c-terminal domain-containing protein | SAMN04488524_0667 | Not Available | Negative | 803800 - 804498 | 26907.2 |
| wgr domain-containing protein, predicted dna-binding domain in molr | SAMN04488524_0668 | Not Available | Positive | 804685 - 807780 | 118802.0 |
| swim zinc finger | SAMN04488524_0669 | Not Available | Positive | 807784 - 809109 | 49117.5 |
| hypothetical protein | SAMN04488524_0670 | Not Available | Negative | 809260 - 809433 | 6495.72 |
| ligand-binding srpbcc domain-containing protein | SAMN04488524_0673 | Not Available | Positive | 811574 - 812044 | 18480.5 |
| hypothetical protein | SAMN04488524_0674 | Not Available | Negative | 812036 - 812416 | 14869.2 |
| radc-like jab domain-containing protein | SAMN04488524_0675 | Not Available | Positive | 812569 - 813078 | 19486.2 |
| redoxin | SAMN04488524_0676 | Not Available | Negative | 813211 - 814308 | 41042.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

