Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, hxlr family | SAMN04488524_0643 | Not Available | Positive | 780796 - 781152 | 13385.4 |
| trna 2-selenouridine synthase | SAMN04488524_0644 | Not Available | Positive | 781149 - 782180 | 38915.0 |
| selenophosphate synthase | SAMN04488524_0645 | Not Available | Positive | 782137 - 783231 | 38729.7 |
| hypothetical protein | SAMN04488524_0646 | Not Available | Positive | 783263 - 783628 | 14038.1 |
| arylsulfatase a | SAMN04488524_0647 | Not Available | Negative | 783629 - 785116 | 56065.0 |
| arylsulfatase a | SAMN04488524_0648 | Not Available | Negative | 785121 - 786593 | 53137.8 |
| arylsulfatase a | SAMN04488524_0649 | Not Available | Negative | 786665 - 788038 | 50808.3 |
| starch-binding associating with outer membrane | SAMN04488524_0650 | Not Available | Negative | 788046 - 789704 | 62314.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_0653 | Not Available | Negative | 794533 - 795102 | 22535.2 |
| transcriptional regulator, arac family with amidase-like domain | SAMN04488524_0654 | Not Available | Positive | 795185 - 796162 | 36955.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

