Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | SAMN04488524_0633 | Not Available | Negative | 770159 - 771406 | 47587.6 |
| cu(i)/ag(i) efflux system membrane protein cusa/sila | SAMN04488524_0634 | Not Available | Negative | 771393 - 773330 | 71511.5 |
| heavy metal efflux pump, czca family | SAMN04488524_0635 | Not Available | Negative | 773327 - 774625 | 48228.5 |
| heavy-metal-associated domain-containing protein | SAMN04488524_0636 | Not Available | Negative | 774655 - 775005 | 12662.3 |
| hypothetical protein | SAMN04488524_0637 | Not Available | Negative | 775166 - 775570 | 15030.7 |
| copper chaperone copz | SAMN04488524_0638 | Not Available | Negative | 775641 - 775853 | 7715.14 |
| cu2+-exporting atpase | SAMN04488524_0639 | Not Available | Negative | 775884 - 778106 | 79021.9 |
| hypothetical protein | SAMN04488524_0640 | Not Available | Negative | 778218 - 778859 | 22898.7 |
| arac-type dna-binding protein | SAMN04488524_0641 | Not Available | Negative | 778972 - 779808 | 32650.2 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04488524_0642 | Not Available | Negative | 779832 - 780713 | 31029.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

