Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_0623 | Not Available | Negative | 762669 - 763424 | 28770.2 |
| hypothetical protein | SAMN04488524_0624 | Not Available | Negative | 763427 - 764410 | 37669.5 |
| hypothetical protein | SAMN04488524_0625 | Not Available | Positive | 764435 - 764836 | 15316.9 |
| Trna-cys | Not Available | Not Available | Positive | 764988 - 765061 | Not Available |
| hypothetical protein | SAMN04488524_0627 | Not Available | Positive | 765250 - 765642 | 14315.2 |
| uncharacterized protein | SAMN04488524_0628 | Not Available | Negative | 765632 - 766648 | 36511.5 |
| hypothetical protein | SAMN04488524_0629 | Not Available | Negative | 766648 - 767079 | 16134.7 |
| protein of unknown function | SAMN04488524_0630 | Not Available | Negative | 767139 - 767702 | 19650.3 |
| membrane fusion protein, cu(i)/ag(i) efflux system | SAMN04488524_0631 | Not Available | Negative | 767724 - 768956 | 44882.2 |
| hlyd family secretion protein | SAMN04488524_0632 | Not Available | Negative | 768970 - 770181 | 43274.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

