Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_0028 | Not Available | Negative | 27946 - 29400 | 54057.0 |
| heat repeat | SAMN04488524_0029 | Not Available | Negative | 29428 - 32874 | 124383.0 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488524_0030 | Not Available | Negative | 32921 - 34201 | 47815.3 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN04488524_0031 | Not Available | Positive | 34425 - 35660 | 45063.3 |
| curved dna-binding protein | SAMN04488524_0032 | Not Available | Positive | 35739 - 36665 | 34376.4 |
| merr hth family regulatory protein | SAMN04488524_0033 | Not Available | Positive | 36662 - 36952 | 11300.6 |
| arac-type dna-binding protein | SAMN04488524_0034 | Not Available | Positive | 37111 - 38052 | 35967.8 |
| methylamine utilisation protein maue | SAMN04488524_0035 | Not Available | Positive | 38313 - 38762 | 16552.7 |
| hypothetical protein | SAMN04488524_0036 | Not Available | Positive | 38845 - 39156 | 11047.1 |
| susd family protein | SAMN04488524_0037 | Not Available | Negative | 39206 - 40570 | 51469.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

