Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | SAMN04488524_0543 | Not Available | Negative | 709125 - 710258 | 41734.3 |
| protein of unknown function | SAMN04488524_0544 | Not Available | Negative | 710299 - 711192 | 32153.5 |
| susd family protein | SAMN04488524_0545 | Not Available | Negative | 711251 - 712612 | 50695.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0546 | Not Available | Negative | 712624 - 716196 | 131072.0 |
| fecr family protein | SAMN04488524_0547 | Not Available | Negative | 716338 - 717465 | 41820.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_0548 | Not Available | Positive | 717578 - 718171 | 22543.3 |
| Trna-gly | Not Available | Not Available | Positive | 718235 - 718310 | Not Available |
| hypothetical protein | SAMN04488524_0550 | Not Available | Negative | 718514 - 718792 | 10577.8 |
| hypothetical protein | SAMN04488524_0551 | Not Available | Negative | 718868 - 719269 | 14747.8 |
| hypothetical protein | SAMN04488524_0552 | Not Available | Negative | 719289 - 719516 | 8412.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

