Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase / selenocysteine lyase | SAMN04488524_0533 | Not Available | Negative | 699080 - 700294 | 44591.0 |
| iron-regulated abc transporter permease protein sufd | SAMN04488524_0534 | Not Available | Negative | 700294 - 701598 | 48239.8 |
| iron-regulated abc transporter atpase subunit sufc | SAMN04488524_0535 | Not Available | Negative | 701611 - 702381 | 28450.3 |
| iron-regulated abc transporter membrane component sufb | SAMN04488524_0536 | Not Available | Negative | 702416 - 703861 | 53987.3 |
| predicted d-glycerate permease | SAMN04488524_0537 | Not Available | Positive | 703980 - 705317 | 46577.9 |
| glycerate kinase | SAMN04488524_0538 | Not Available | Positive | 705317 - 706453 | 39528.9 |
| hypothetical protein | SAMN04488524_0539 | Not Available | Positive | 706501 - 706749 | 8983.15 |
| hypothetical protein | SAMN04488524_0540 | Not Available | Positive | 707050 - 707250 | 7213.4 |
| hypothetical protein | SAMN04488524_0541 | Not Available | Negative | 707267 - 707971 | 25725.4 |
| peroxiredoxin | SAMN04488524_0542 | Not Available | Negative | 708006 - 709097 | 40283.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

