Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa synthetase beta subunit | SAMN04488524_0513 | Not Available | Positive | 678597 - 679787 | 42831.6 |
| asparaginyl-trna synthetase | SAMN04488524_0514 | Not Available | Positive | 680250 - 681740 | 56973.1 |
| glutamate synthase domain-containing protein 2 | SAMN04488524_0515 | Not Available | Negative | 681814 - 683484 | 60883.4 |
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | SAMN04488524_0516 | Not Available | Positive | 683563 - 684183 | 22958.5 |
| sodium/proton antiporter, nhaa family | SAMN04488524_0517 | Not Available | Positive | 684195 - 685397 | 43049.9 |
| tryptophan synthase, alpha chain | SAMN04488524_0518 | Not Available | Negative | 685387 - 686154 | 28070.7 |
| tryptophan synthase beta chain | SAMN04488524_0519 | Not Available | Negative | 686156 - 687337 | 43191.8 |
| phosphoribosylanthranilate isomerase | SAMN04488524_0520 | Not Available | Negative | 687334 - 687966 | 23423.4 |
| anthranilate phosphoribosyltransferase | SAMN04488524_0521 | Not Available | Negative | 687994 - 688983 | 36130.5 |
| short-chain dehydrogenase | SAMN04488524_0522 | Not Available | Negative | 689201 - 690016 | 29351.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

