Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488524_0483 | Not Available | Negative | 646079 - 647959 | 68415.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0484 | Not Available | Negative | 647970 - 651434 | 126740.0 |
| fecr family protein | SAMN04488524_0485 | Not Available | Negative | 651550 - 652701 | 42923.2 |
| bnr repeat-containing family member | SAMN04488524_0486 | Not Available | Negative | 652828 - 654282 | 55363.7 |
| ribosome small subunit-dependent gtpase a | SAMN04488524_0487 | Not Available | Positive | 654556 - 655452 | 33765.4 |
| hypothetical protein | SAMN04488524_0488 | Not Available | Negative | 655256 - 655966 | 27420.1 |
| tpr repeat-containing protein | SAMN04488524_0489 | Not Available | Negative | 655956 - 656558 | 22857.6 |
| hypothetical protein | SAMN04488524_0490 | Not Available | Negative | 656676 - 657050 | 13959.0 |
| hypothetical protein | SAMN04488524_0491 | Not Available | Positive | 657478 - 658113 | 22854.7 |
| hypothetical protein | SAMN04488524_0492 | Not Available | Positive | 658432 - 659322 | 34409.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

