Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose mutarotase | SAMN04488524_0473 | Not Available | Negative | 631348 - 631662 | 12206.5 |
| alpha-l-rhamnosidase n-terminal domain-containing protein | SAMN04488524_0474 | Not Available | Negative | 631687 - 633996 | 87006.1 |
| hypothetical protein | SAMN04488524_0475 | Not Available | Negative | 634004 - 636133 | 80310.7 |
| hypothetical protein | SAMN04488524_0476 | Not Available | Negative | 636134 - 637366 | 43433.2 |
| heparinase ii/iii-like protein | SAMN04488524_0477 | Not Available | Negative | 637404 - 639377 | 74646.9 |
| sialate o-acetylesterase | SAMN04488524_0478 | Not Available | Negative | 639400 - 640818 | 52262.1 |
| glycosyl hydrolase family 88 | SAMN04488524_0479 | Not Available | Negative | 640826 - 642046 | 46162.6 |
| alpha-l-rhamnosidase | SAMN04488524_0480 | Not Available | Negative | 642059 - 643816 | 65338.3 |
| right handed beta helix region | SAMN04488524_0481 | Not Available | Negative | 643841 - 644998 | 41703.0 |
| protein of unknown function | SAMN04488524_0482 | Not Available | Negative | 645093 - 646037 | 33901.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

