Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_4772 | Not Available | Positive | 5639121 - 5642531 | 125532.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_4773 | Not Available | Positive | 5642617 - 5643201 | 22721.7 |
| hypothetical protein | SAMN04488524_4774 | Not Available | Positive | 5643427 - 5644479 | 38230.6 |
| hypothetical protein | SAMN04488524_4775 | Not Available | Positive | 5644532 - 5645683 | 41394.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_4776 | Not Available | Positive | 5645699 - 5648509 | 103048.0 |
| starch-binding associating with outer membrane | SAMN04488524_4777 | Not Available | Positive | 5648521 - 5650296 | 64484.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_4778 | Not Available | Positive | 5650314 - 5653451 | 114845.0 |
| starch-binding associating with outer membrane | SAMN04488524_4779 | Not Available | Positive | 5653460 - 5655265 | 67500.1 |
| trehalase | SAMN04488524_4780 | Not Available | Positive | 5655280 - 5658024 | 103699.0 |
| atp-dependent clp protease atp-binding subunit clpc | SAMN04488524_4781 | Not Available | Positive | 5658460 - 5661000 | 94632.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

