Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_4752 | Not Available | Positive | 5615670 - 5616005 | 12362.1 |
| hypothetical protein | SAMN04488524_4753 | Not Available | Positive | 5616137 - 5616571 | 16244.5 |
| hypothetical protein | SAMN04488524_4754 | Not Available | Positive | 5616579 - 5620295 | 138101.0 |
| rhs repeat-associated core domain-containing protein | SAMN04488524_4755 | Not Available | Positive | 5620329 - 5624000 | 136823.0 |
| hypothetical protein | SAMN04488524_4756 | Not Available | Positive | 5624002 - 5624412 | 16144.1 |
| type ii secretion system protein g (gspg) | SAMN04488524_4757 | Not Available | Positive | 5624717 - 5625124 | 15210.4 |
| hypothetical protein | SAMN04488524_4758 | Not Available | Positive | 5625137 - 5625652 | 19054.2 |
| general secretion pathway protein e | SAMN04488524_4759 | Not Available | Positive | 5625639 - 5627069 | 53794.7 |
| type ii secretion system protein d (gspd) | SAMN04488524_4760 | Not Available | Positive | 5627071 - 5629023 | 70648.7 |
| hypothetical protein | SAMN04488524_4761 | Not Available | Positive | 5629025 - 5630134 | 40769.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

