Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine-6-phosphate deacetylase | SAMN04488524_4666 | Not Available | Negative | 5525027 - 5526217 | 43154.0 |
| predicted dehydrogenase | SAMN04488524_4667 | Not Available | Negative | 5526220 - 5527440 | 45111.3 |
| glucose/galactose transporter | SAMN04488524_4668 | Not Available | Negative | 5527478 - 5528818 | 48693.9 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488524_4669 | Not Available | Positive | 5529007 - 5530431 | 53023.8 |
| glucosamine-6-phosphate deaminase | SAMN04488524_4670 | Not Available | Positive | 5530542 - 5531279 | 27265.3 |
| hypothetical protein | SAMN04488524_4671 | Not Available | Negative | 5531323 - 5531643 | 11681.8 |
| response regulator receiver domain-containing protein | SAMN04488524_4672 | Not Available | Negative | 5531828 - 5532244 | 15822.3 |
| hypothetical protein | SAMN04488524_4673 | Not Available | Negative | 5532323 - 5532448 | 4890.99 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488524_4674 | Not Available | Negative | 5532542 - 5535625 | 109730.0 |
| starch-binding associating with outer membrane | SAMN04488524_4675 | Not Available | Negative | 5535615 - 5537384 | 66491.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

