Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_4656 | Not Available | Negative | 5506791 - 5509943 | 115054.0 |
| chondroitin ac lyase | SAMN04488524_4657 | Not Available | Negative | 5510109 - 5512163 | 77335.3 |
| arylsulfatase a | SAMN04488524_4658 | Not Available | Negative | 5512186 - 5513595 | 52251.7 |
| chondroitin-sulfate-abc endolyase/exolyase | SAMN04488524_4659 | Not Available | Negative | 5513597 - 5516656 | 115023.0 |
| signal transduction histidine kinase | SAMN04488524_4660 | Not Available | Negative | 5516750 - 5520868 | 155063.0 |
| nadph2:quinone reductase | SAMN04488524_4661 | Not Available | Negative | 5520888 - 5521901 | 36343.9 |
| tigr02453 family protein | SAMN04488524_4662 | Not Available | Positive | 5521948 - 5522673 | 27919.1 |
| hypothetical protein | SAMN04488524_4663 | Not Available | Positive | 5522769 - 5523038 | 10507.9 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04488524_4664 | Not Available | Negative | 5523035 - 5523835 | 28242.8 |
| transcriptional regulator, laci family | SAMN04488524_4665 | Not Available | Positive | 5524011 - 5525030 | 37477.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

