Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_0431 | Not Available | Negative | 581648 - 582082 | 16394.2 |
| hypothetical protein | SAMN04488524_0432 | Not Available | Negative | 582234 - 582629 | 15737.9 |
| hypothetical protein | SAMN04488524_0433 | Not Available | Positive | 582787 - 583011 | 9001.02 |
| hypothetical protein | SAMN04488524_0435 | Not Available | Positive | 583866 - 586658 | 110223.0 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_0436 | Not Available | Negative | 586836 - 588080 | 46792.4 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_0437 | Not Available | Negative | 588092 - 589360 | 48334.1 |
| susd family protein | SAMN04488524_0438 | Not Available | Negative | 589407 - 590846 | 53313.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0439 | Not Available | Negative | 590857 - 594525 | 134394.0 |
| fecr family protein | SAMN04488524_0440 | Not Available | Negative | 594644 - 595816 | 43164.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_0441 | Not Available | Negative | 595892 - 596452 | 21887.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

