Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase | SAMN04488524_4625 | Not Available | Negative | 5461260 - 5463326 | 78184.2 |
| right handed beta helix region | SAMN04488524_4626 | Not Available | Negative | 5463327 - 5464778 | 53886.9 |
| starch-binding associating with outer membrane | SAMN04488524_4627 | Not Available | Negative | 5464861 - 5466612 | 64776.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_4628 | Not Available | Negative | 5466612 - 5469695 | 113087.0 |
| starch-binding associating with outer membrane | SAMN04488524_4629 | Not Available | Negative | 5469736 - 5471397 | 62463.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_4630 | Not Available | Negative | 5471402 - 5474473 | 112915.0 |
| two component regulator propeller | SAMN04488524_4631 | Not Available | Positive | 5474651 - 5478724 | 153872.0 |
| ferritin | SAMN04488524_4632 | Not Available | Negative | 5479036 - 5479563 | 20536.2 |
| hypothetical protein | SAMN04488524_4633 | Not Available | Negative | 5479678 - 5480043 | 14031.2 |
| methyltransferase domain-containing protein | SAMN04488524_4634 | Not Available | Negative | 5480144 - 5480812 | 24154.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

