Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypepd_reg-like domain-containing protein | SAMN04488524_4615 | Not Available | Negative | 5448496 - 5451246 | 100546.0 |
| transcriptional regulator, lyttr family | SAMN04488524_4616 | Not Available | Negative | 5451340 - 5452224 | 33810.6 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN04488524_4617 | Not Available | Positive | 5452325 - 5453851 | 55673.5 |
| rod shape-determining protein mreb | SAMN04488524_4618 | Not Available | Positive | 5453937 - 5454959 | 36846.1 |
| rod shape-determining protein mrec | SAMN04488524_4619 | Not Available | Positive | 5455005 - 5455841 | 30618.0 |
| rod shape-determining protein mred | SAMN04488524_4620 | Not Available | Positive | 5455876 - 5456349 | 18305.1 |
| penicillin-binding protein 2 | SAMN04488524_4621 | Not Available | Positive | 5456349 - 5458301 | 72434.7 |
| rod shape determining protein roda | SAMN04488524_4622 | Not Available | Positive | 5458298 - 5459563 | 46985.0 |
| hypothetical protein | SAMN04488524_4623 | Not Available | Negative | 5459560 - 5460573 | 38034.0 |
| thymidine kinase | SAMN04488524_4624 | Not Available | Positive | 5460672 - 5461253 | 21286.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

